CDS

Accession Number TCMCG057C11871
gbkey CDS
Protein Id XP_018476311.1
Location join(13542981..13543036,13543114..13543213,13543298..13543366,13543456..13543692,13543787..13543964,13544070..13544202,13544278..13544437,13544504..13544654,13544736..13544839,13544935..13545093,13545225..13545293,13545376..13545444,13545506..13545643,13545728..13545856,13545944..13546091,13546218..13546228,13546311..13546451,13546536..13546661,13547033..13547095,13547230..13547325,13547582..13547840,13547917..13548095,13548188..13548301)
Gene LOC108847543
GeneID 108847543
Organism Raphanus sativus

Protein

Length 962aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018620809.1
Definition PREDICTED: villin-2-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Z
Description actin filament capping
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K05761        [VIEW IN KEGG]
ko:K05768        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04666        [VIEW IN KEGG]
ko04810        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map04666        [VIEW IN KEGG]
map04810        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0001558        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007015        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030834        [VIEW IN EMBL-EBI]
GO:0030835        [VIEW IN EMBL-EBI]
GO:0030837        [VIEW IN EMBL-EBI]
GO:0031333        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032272        [VIEW IN EMBL-EBI]
GO:0032432        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043242        [VIEW IN EMBL-EBI]
GO:0043244        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051014        [VIEW IN EMBL-EBI]
GO:0051015        [VIEW IN EMBL-EBI]
GO:0051017        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051494        [VIEW IN EMBL-EBI]
GO:0051693        [VIEW IN EMBL-EBI]
GO:0061572        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1901879        [VIEW IN EMBL-EBI]
GO:1901880        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902904        [VIEW IN EMBL-EBI]
GO:2000012        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGGGTCAGCGAAAGTATTGGATCCTGCATTTCAAGGAGCTGGACAGAAACCAGGAACTGAGATCTGGAGAATCGAGAATTTCGAGGCGGTTCCAGTGCCTAAGTCTGAGCATGGAAAGTTCTATATGGGAGACACTTACATTGTCTTGCAGACAACACAGAACAAAGGAGGTGCTTATCTGTTTGACATACATTTCTGGATTGGGAAAGACACTAGTCAGGATGAATCTGGAACAGCAGCTGTTAAAACAGTTGAACTCGATGCAGTTCTTGGAGGCCGTGCTGTCCAACACCGGGAAATTCAGGGTCATGAATCTGACAAATTCTTGTCTTACTTCAAGCCATGTATTATACCCTTAGAGGGTGGTGTTGCGTCTGGTTTCAAAACACCTGAAGAAGAGGTGTTCGAGACTCGGTTATATACCTGCAAAGGAAAACGTGCAATTCGTTTGAAGCAGGTTCCTTTTGCCCGTTCATCGCTGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATCTATCAGTTCAACGGTGCGAACTCAAACATCCAAGAGAGAGCCAAAGCTTTGGAAGTTGTTCAGTATTTGAAAGACAAGTATCACGAAGGAACATGCGATGTTGCTATTGTTGACGATGGAAAACTAGATACAGAATCAGATTCTGGTGAGTTTTGGGTCCTGTTTGGTGGGTTTGCTCCAATCGCAAGGAAAGTTGCCAATGATGATGATGTTATCCCGGAATCAACTCCACCTAAGCTATATTGCATCGCTGATGGTCAGATGGAACCTATAGAGGGTGACCTATCCAAATCTATGATGGAAAACACTAAATGCTACCTCTTGGACTGTGGTGCTGAGGTGTTTGTATGGGTTGGTCGTGTGACTCAAATGGATGAGAGGAAAGCTGCTAATCAATCTGCTGAGGAGTTTCTTGCTAGTGAAAATAGGCCAAAGGCAACACGACTGACACGTGTTATCCAAGGTTACGAGTCCCACTCTTTCAAGTGTAACTTTGACTCTTGGCCATCAGGCTCTGCTGCTCCTGGTAACGAAGAAGGACGAGGCAAAGTTGCTGCTTTGCTGAAGCAACAAGGTGTTGGGCTGAAGGGCATTTCGAAAAGTGCAACACCTGTGAATGAGGATATTCCACCTCTGCTTGAAGCTGGTGGAAAGTTGGAGGTTTGGTTTATTGATGGTAAAGTCAAGAGCCCGTTGCCTAAAGAAGATATTGGCAAGTTCTATTCTGGGGACTGCTATTTGGTCCTTTACACCTATCATTCTGGAGATAGGAAAGAAGACTATTTCTTGTGCTGCTGGTTTGGAAATAATAGCATTCAGGAGGACCAAGATACAGCAGTTAGACTGGCGAATACAATGTCAAACTCGTTAAAGGGAAGACCTGTGCAGGGGCGTGTCTACGAGGGTAAAGAGCCTCCACAGTTTGTTGCCCTTTTCCAGCCTATGGTGATCCTAAAGGGTGGCTTGAGCTCTGGCTACAAAAGCAACTTGGAAGAGAAAGGTTCACCAGACGAGATTTACACACCAGAATCAATTGCACTAATTCAAGTATCTGGAACTGGAGTTCACAATAACAAGGCGCTGCAAGTTGAACCAGTGGCAACATCTTTGAACTCTTATGAGTGCTTCCTACTGCAATCTGGTACTTCTGTGTTCCTTTGGCATGGAAATCAAAGTGCGCATGAACTGCTAGAACTGGCTGCTAAAGTTGCTGAATTCTTGAAGCCTGGGGTTACACTCAAGCATGCCAAAGAAGGAACAGAGAGCTCAACCTTTTGGTTTGCACTTGGAGGAAAGCAGAACTTCACCAGCAAGAAGGCTTCACCTGAGACTGTCAGGGATCCTCACCTATTCTCATTTTCTTTCAACAAAGGAAAGTTTCAGGTTGAAGAGATCTACAACTTTGCTCAAGATGACCTATTGACTGAGGATATATATTTTCTTGACACTCATGCTGAAGTTTTTGTCTGGGTTGGTCAATGTGTGGACCCCAAGGAAAAGCAAACTGTGTTTGAGATTGGCCAAAAATACATAGATCGTGCTGGATCCTTGGAAGGCTTGTCTCCTAAAGTTCCACTATACAAAATCAACGAAGGGAACGAACCATGCTTCTTCACCACTTACTTTTCTTGGGATCACACTAAATCTATCGTGCAAGGAAACTCATTCCAGAAAAAAGCAGCCTTGTTATTTGGCACTCACCACGTTGTAGAGGACAAGTCTAGCGGTGGTGGACCAAGGCAAAGAGCTGAGGCACTAGCTGCCTTAAATTCTGCCTTTAATTCTTCTTCTAGCAGACCTGCCTATTCGAGCCAGGACAGATCAAGCGAAAGCCAAGAGGGTCCAAGACAAAGAGCTGAAGCTTTAGCCGCCTTGACGTCCGCGTTTAGTTCATCATCGACCAAAGCGCCTCCACCACCAAGGTCAGTGGGGACGAGTCAGGCTTCACAGAGAGCAGCAGCAGTGGCTGCTCTCTCTCAAGTTCTTGTTGCTGAGAATAAGAAAACACCTGATACCTCTCCTACAAGAAGATCTACTAGCTCCAACCCAGCAGATGACTCCTCTCTAAATGAAGCGAAAGATGATCAAGCAGATGCTTCAGAAGAAGAGGAGCCTGAAGTGAAACAGGAGGAAACAGAAGAGCAAGATGAATCTGTGATAGATCCAAGTGGAGCAACTTTCACTTACGAACAGCTGAAAGCCAATTCTGAGAACCCAGTGACTGGTATAGATTACAAGCGCAGAGAGGCTTATCTATCTGAGGAAGAGTTCCCAAATGTGTTTGGGATGGAAAAAGACGCATTCAACAACTTACCTCGTTGGAAGCAAGATCTGCTTAAGAAGAAGTTTGACTTGTTCTAG
Protein:  
MSGSAKVLDPAFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDESGTAAVKTVELDAVLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKTPEEEVFETRLYTCKGKRAIRLKQVPFARSSLNHDDVFILDTKEKIYQFNGANSNIQERAKALEVVQYLKDKYHEGTCDVAIVDDGKLDTESDSGEFWVLFGGFAPIARKVANDDDVIPESTPPKLYCIADGQMEPIEGDLSKSMMENTKCYLLDCGAEVFVWVGRVTQMDERKAANQSAEEFLASENRPKATRLTRVIQGYESHSFKCNFDSWPSGSAAPGNEEGRGKVAALLKQQGVGLKGISKSATPVNEDIPPLLEAGGKLEVWFIDGKVKSPLPKEDIGKFYSGDCYLVLYTYHSGDRKEDYFLCCWFGNNSIQEDQDTAVRLANTMSNSLKGRPVQGRVYEGKEPPQFVALFQPMVILKGGLSSGYKSNLEEKGSPDEIYTPESIALIQVSGTGVHNNKALQVEPVATSLNSYECFLLQSGTSVFLWHGNQSAHELLELAAKVAEFLKPGVTLKHAKEGTESSTFWFALGGKQNFTSKKASPETVRDPHLFSFSFNKGKFQVEEIYNFAQDDLLTEDIYFLDTHAEVFVWVGQCVDPKEKQTVFEIGQKYIDRAGSLEGLSPKVPLYKINEGNEPCFFTTYFSWDHTKSIVQGNSFQKKAALLFGTHHVVEDKSSGGGPRQRAEALAALNSAFNSSSSRPAYSSQDRSSESQEGPRQRAEALAALTSAFSSSSTKAPPPPRSVGTSQASQRAAAVAALSQVLVAENKKTPDTSPTRRSTSSNPADDSSLNEAKDDQADASEEEEPEVKQEETEEQDESVIDPSGATFTYEQLKANSENPVTGIDYKRREAYLSEEEFPNVFGMEKDAFNNLPRWKQDLLKKKFDLF